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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015913362.1_cds_XP_016463399.1_56552
CDS Infomation

[gene=LOC107786447] [db_xref=GeneID:107786447] [protein=agglutinin-like] [partial=3'] [protein_id=XP_016463399.1] [location=complement(join(<131107..131118,131912..132211,132723..132944,133085..133150,134741..135067,135598..135822,157494..157553))] [gbkey=CDS]
Sequence

ATGGAAAGAGGAAAACAAATTGACGGAGAAAGAGAGAAAGGGGAATTAGCAAACTTTGAG
GTGAAGGGAAATCAAGTGAGTTACGATCAAGCGGACTCAATATTAGTGGAGCCATGGGGA
GGCACTGGTGGATCAGAATGGTATTACAAGCTGAAAAGTCCCATTAAAAAAATATGGATT
ACTCATGGAGATTGTATAAAATCCATCATGTTCAGGATCATTAATGAACAAGGTACTACC
ATAGACTCACCAAATTTTGGTTGGGGTGGAGGTCGAAGAGACAAGGTTGTTATTGAGGCA
ACTCCATTGGAATATTTAACAGGCATCAAGGGGACATTTGGACGTTGTGGTAGCTATTCT
GTTATAAAATCTCTATGTTTTATAACTAATGCAAAGAATTATGGACCATTTGGGTGTGAG
GCGGGAACCCCATTTTCACTTGTGATGAAAGAAGGTGGAGCTATTGTGGGATTTCACGGG
CGTTGTGGAGCGTATCTTGATGCTATTGGTGTTTATTTGCGGAAACTTACTCCTCCCACT
TTATCAAAGGAACCTGAAGCTAAAAACATTGAGCCAAATGAACATGTGGTTGAAGAAATT
GAAATCCATGACGGATCAGGATCAGGTGATCATAAGAAAGGGAAGATAACAAAAAATGAA
AGTAAATTGCCAACAATGGAAAATCAAGTGAGTTACGATCAAGCAGATTCAATATTGGTG
GAGCCATGGGGAGGCAATATTGGTGGATCAGAATGGAATTACAAGTTGAAAAGTTCCATT
AAAGAAATATTGATTGCTCATGGAGATGTTATAGACTCCATCATGTTCAGAACCATTACT
GAACAAGGTACTACCATAGACTCACCAAAGTTTGGTAGGAATGGAGGTCGAATATATAAG
GTCGTTATTGAGGCAACTCCATTGGAACATTTAACGGGCATCAAGGGTACATTTGAATGT
TTTGATGGCCATTCGGTTATAAAATCTCTATGTTTTATAACTAATGCAAATAATTATGGA
CCATTTGGGTCTGAGGCTGGTGGAACCCCATTTTCACTTGTGATGAAAGAAGGTGTAGCT
ATTGTGGGATTTCACGGGCGTTCTGGGTTGTACCTTGATGCTATTGGTGTTTATTTGCAG
AAACTTGCTTCTCCCACTTCAACAAAGGAACATACGGTTGAAGACATTGAAATCCGTGAC
GTGTCATTGTCT

Peptide Sequence

PEP ID

XP_016463399.1
PEP Infomation

PREDICTED: agglutinin-like, partial [Nicotiana tabacum]
Sequence

MERGKQIDGEREKGELANFEVKGNQVSYDQADSILVEPWGGTGGSEWYYKLKSPIKKIWI
THGDCIKSIMFRIINEQGTTIDSPNFGWGGGRRDKVVIEATPLEYLTGIKGTFGRCGSYS
VIKSLCFITNAKNYGPFGCEAGTPFSLVMKEGGAIVGFHGRCGAYLDAIGVYLRKLTPPT
LSKEPEAKNIEPNEHVVEEIEIHDGSGSGDHKKGKITKNESKLPTMENQVSYDQADSILV
EPWGGNIGGSEWNYKLKSSIKEILIAHGDVIDSIMFRTITEQGTTIDSPKFGRNGGRIYK
VVIEATPLEHLTGIKGTFECFDGHSVIKSLCFITNANNYGPFGSEAGGTPFSLVMKEGVA
IVGFHGRSGLYLDAIGVYLQKLASPTSTKEHTVEDIEIRDVSLS

Transcript Sequence

Gene sequence data has not been registered.